Basic Troubleshooting
- If a user loads other files onto the dongle, FlowJo will not be able to recognize the dongle.
- Fix: Remove all files except for the license.key file
- The license.key file should be the only non-hidden file on the dongle and it should be named license.key. If it is not named license.key, you should rename it or have it replaced. Email flowjo@bd.com or flowjooffice@bd.com with the Dongle ID (instructions below)
- On Mac computers, if the dongle is renamed something different than FJTHUMB, FlowJo will not be able to to recognize the dongle.
- Fix: Rename the dongle FJTHUMB
- If the dongle is not mechanically broken, so it is not recognized (loaded or mounted) at all by any computer, FlowJo will not be able to recognize the dongle.
- Fix: The dongle will need to be replaced by FlowJo for a replacement fee + shipping.
- Did you update your Mac OS and now your dongle is no longer recognized by FlowJo?
- Fix: You will need to allow full disk access for FlowJo on your MAC. Detailed instructions linked below:
- Are you running a version of Mac OS Sequoia? There were significant issues mounting USB drives on MacOS Sequoia, which were resolved in later updates by Apple.
- We recommend that you remove the dongle from the computer after every use so that the dongle does not overheat in your computer’s USB port.
- If a dongle is corrupt, a user will need to reformat their dongle and contact us for a replacement license.key file. Please see below links on how to obtain your Dongle ID for this purpose.
Finding a Dongle ID
Finding Dongle ID (Newer Dongles – Black with cap – Delivered starting March 2023)
Finding Dongle ID (Older Dongles – Red/Black Switchblade 2009-2023)
Finding Dongle ID (Legacy Black Dongles <2009)
Error Codes
Error Message = Invalid dongle found with serial number %s

The license.key file is either corrupt or invalid in some way, rendering the dongle invalid and FlowJo cannot recognize the license.key file. Reach out to flowjo@bd.com and provide the Dongle Hardware ID to get a new license.key file for the Dongle.