Latest Updates for FlowJo™ Software


FlowJo™ v11.2 Software is out now! Check out the newest features and update today.


<h2><strong>Latest Updates for FlowJo™ Software</strong></h2>

What’s new?

We’ve listened to your feedback and are excited to introduce FlowJo™ v11.2 Software, delivering the features you’ve been asking for.

This latest release brings a powerful set of enhancements designed to streamline your workfl ow, explore more complex populations, improve data clarity, and boost performance at every step of your analysis. Whether you’re working in fl ow cytometry, imaging, or reporting, FlowJo™ v11.2 Software offers smarter tools and a more seamless experience.

For a complete overview of what’s new, explore the full release notes.

Cluster Explorer
The new workspace in FlowJo™ v11.2 that makes it easy to quickly view and understand clustering results.

  • Clear 2D maps with color-coded clusters and gated populations
  • Automatic display of reduced dimensions (with full user control)
  • Bar charts to quickly spot rare vs. abundant populations
  • Line plots showing median marker expression across clusters
  • Interactive heatmaps to compare clusters at a glance

FlowSOM Clustering

  • Now directly integrated into FlowJo™ v11 Software
  • Combines fast Self-Organizing Maps (SOMs) for initial clustering
  • Applies meta-clustering to group cells into higher-level populations

UMAP Dimensionality Reduction

  • Integrated in FlowJo™ v11 Software for advanced data visualization
  • Provides an alternative to tSNE with better preservation of global data structure
  • Generates intuitive 2D maps to explore complex, high-dimensional data
  • Histogram Overlay Controls in Reports
  • Normalization options: auto, unit area, modal and manual
  • Adjustable histogram offsets distance using a slider

Image Sets (Imaging)

  • Curate biologically relevant images directly in the Image Wall
  • Select an image to automatically create a new population
  • Enables refined gating and population definition
  • Lays the foundation for image-driven analysis workflows

We hope you have fun exploring these new features which are available to you today when you download the latest version of FlowJo™ Software v11.2.

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