Description
The CellCycle plugin automatically identifies the phase of the cell cycle events are in. The plugin is able to perform two or three dimensional cell cycle analysis using a DNA stain (like DAPI), a proliferation marker (like BrdU or EdU), and/or a mitotic marker (like PH3). The algorithm utilizes Hierarchical Density-based Scanning in Applications with Noise (HDBSCAN) to first identify high-density populations within the feature space and then classify them based on relative positioning to one another. (Note: Compatible with Windows and ARM Mac Only)
Algorithm Authors
Mark Colasurdo
Plugin Developers
Mark Colasurdo
Josh Luthy
Applications
Categories
Phenotyping