Description

PaCMAP (Pairwise Controlled Manifold Approximation) is a dimensionality reduction method that can be used for visualizing your high dimensional data in fewer dimensions.*

The advantage of PaCMAP over other dimensionality reduction algorithms, is that it is capable of more robustly maintaining both global and local structures between populations within a data matrix. This algorithm was developed by Yingfan Wang, Haiyang Huang, Cynthia Rudin, and Yaron Shaposhink

*PaCMAP Plugin v2.0.0 is now compatible with new ARM-chip (M-series) Macs. v1.0.0 is not compatible with M-series Macs.


Algorithm Authors

Yingfan Wang

Haiyang Huang

Cynthia Rudin

Yaron Shaposhink

Plugin Developers

Josh Luthy



Applications
Applications Applications
Categories

Visualization

Dimensionality Reduction

2.0.0

September 29th, 2025

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